Genetic Diversity of Candidatus Liberibacter asiaticus Based on Two Hypervariable Effector Genes in Thailand
Identifieur interne : 000A70 ( Main/Exploration ); précédent : 000A69; suivant : 000A71Genetic Diversity of Candidatus Liberibacter asiaticus Based on Two Hypervariable Effector Genes in Thailand
Auteurs : Thamrongjet Puttamuk [Thaïlande, États-Unis] ; Lijuan Zhou [États-Unis] ; Niphone Thaveechai [Thaïlande] ; Shouan Zhang [États-Unis] ; Cheryl M. Armstrong [États-Unis] ; Yongping Duan [États-Unis]Source :
- PLoS ONE [ 1932-6203 ] ; 2014.
Abstract
Huanglongbing (HLB), also known as citrus greening, is one of the most destructive diseases of citrus worldwide. HLB is associated with three species of ‘
Url:
DOI: 10.1371/journal.pone.0112968
PubMed: 25437428
PubMed Central: 4249863
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetic Diversity of <italic>Candidatus</italic> Liberibacter asiaticus Based on Two Hypervariable Effector Genes in Thailand</title><author><name sortKey="Puttamuk, Thamrongjet" sort="Puttamuk, Thamrongjet" uniqKey="Puttamuk T" first="Thamrongjet" last="Puttamuk">Thamrongjet Puttamuk</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok, Thailand</addr-line></nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok</wicri:regionArea><wicri:noRegion>Bangkok</wicri:noRegion></affiliation><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Zhou, Lijuan" sort="Zhou, Lijuan" uniqKey="Zhou L" first="Lijuan" last="Zhou">Lijuan Zhou</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Thaveechai, Niphone" sort="Thaveechai, Niphone" uniqKey="Thaveechai N" first="Niphone" last="Thaveechai">Niphone Thaveechai</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok, Thailand</addr-line></nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok</wicri:regionArea><wicri:noRegion>Bangkok</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Shouan" sort="Zhang, Shouan" uniqKey="Zhang S" first="Shouan" last="Zhang">Shouan Zhang</name><affiliation wicri:level="2"><nlm:aff id="aff3"><addr-line>Tropical Research and Education Center, University of Florida, Homestead, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Tropical Research and Education Center, University of Florida, Homestead, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Armstrong, Cheryl M" sort="Armstrong, Cheryl M" uniqKey="Armstrong C" first="Cheryl M." last="Armstrong">Cheryl M. Armstrong</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Duan, Yongping" sort="Duan, Yongping" uniqKey="Duan Y" first="Yongping" last="Duan">Yongping Duan</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of 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xml:lang="en" level="a" type="main">Genetic Diversity of <italic>Candidatus</italic> Liberibacter asiaticus Based on Two Hypervariable Effector Genes in Thailand</title><author><name sortKey="Puttamuk, Thamrongjet" sort="Puttamuk, Thamrongjet" uniqKey="Puttamuk T" first="Thamrongjet" last="Puttamuk">Thamrongjet Puttamuk</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok, Thailand</addr-line></nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok</wicri:regionArea><wicri:noRegion>Bangkok</wicri:noRegion></affiliation><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Zhou, Lijuan" sort="Zhou, Lijuan" uniqKey="Zhou L" first="Lijuan" last="Zhou">Lijuan Zhou</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Thaveechai, Niphone" sort="Thaveechai, Niphone" uniqKey="Thaveechai N" first="Niphone" last="Thaveechai">Niphone Thaveechai</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok, Thailand</addr-line></nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Department of Plant Pathology, Faculty of Agriculture, Kasetsart University, Bangkok</wicri:regionArea><wicri:noRegion>Bangkok</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Shouan" sort="Zhang, Shouan" uniqKey="Zhang S" first="Shouan" last="Zhang">Shouan Zhang</name><affiliation wicri:level="2"><nlm:aff id="aff3"><addr-line>Tropical Research and Education Center, University of Florida, Homestead, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Tropical Research and Education Center, University of Florida, Homestead, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Armstrong, Cheryl M" sort="Armstrong, Cheryl M" uniqKey="Armstrong C" first="Cheryl M." last="Armstrong">Cheryl M. Armstrong</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Duan, Yongping" sort="Duan, Yongping" uniqKey="Duan Y" first="Yongping" last="Duan">Yongping Duan</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>U.S. Horticultural Research Laboratory, US Department of Agriculture, Agricultural Research Service, Fort Pierce, Florida</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Huanglongbing (HLB), also known as citrus greening, is one of the most destructive diseases of citrus worldwide. HLB is associated with three species of ‘<italic>Candidatus</italic> Liberibacter’ with ‘<italic>Ca</italic>. L. asiaticus’ (Las) being the most widely distributed around the world, and the only species detected in Thailand. To understand the genetic diversity of Las bacteria in Thailand, we evaluated two closely-related effector genes, <italic>lasA</italic><sub>I</sub> and <italic>lasA</italic><sub>II</sub>, found within the Las prophages from 239 infected citrus and 55 infected psyllid samples collected from different provinces in Thailand. The results indicated that most of the Las-infected samples collected from Thailand contained at least one prophage sequence with 48.29% containing prophage 1 (FP1), 63.26% containing prophage 2 (FP2), and 19.38% containing both prophages. Interestingly, FP2 was found to be the predominant population in Las-infected citrus samples while Las-infected psyllids contained primarily FP1. The multiple banding patterns that resulted from amplification of <italic>lasA</italic><sub>I</sub> imply extensive variation exists within the full and partial repeat sequence while the single band from <italic>lasA</italic><sub>II</sub> indicates a low amount of variation within the repeat sequence. Phylogenetic analysis of Las-infected samples from 22 provinces in Thailand suggested that the bacterial pathogen may have been introduced to Thailand from China and the Philippines. This is the first report evaluating the genetic variation of a large population of <italic>Ca</italic>. L. asiaticus infected samples in Thailand using the two effector genes from Las prophage regions.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Roistacher, Cn" uniqKey="Roistacher C">CN Roistacher</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schwarz, Re" uniqKey="Schwarz R">RE Schwarz</name></author><author><name sortKey="Knor, Lc" uniqKey="Knor L">LC Knor</name></author><author><name sortKey="Prommintara, M" uniqKey="Prommintara M">M Prommintara</name></author><author><name sortKey="Agriculture, Tdo" uniqKey="Agriculture T">TDo Agriculture</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schwarz, Re" uniqKey="Schwarz R">RE Schwarz</name></author><author><name sortKey="Knorr, Lc" uniqKey="Knorr L">LC Knorr</name></author><author><name sortKey="Prommint, M" uniqKey="Prommint M">M 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name="États-Unis"><region name="Floride"><name sortKey="Puttamuk, Thamrongjet" sort="Puttamuk, Thamrongjet" uniqKey="Puttamuk T" first="Thamrongjet" last="Puttamuk">Thamrongjet Puttamuk</name></region><name sortKey="Armstrong, Cheryl M" sort="Armstrong, Cheryl M" uniqKey="Armstrong C" first="Cheryl M." last="Armstrong">Cheryl M. Armstrong</name><name sortKey="Duan, Yongping" sort="Duan, Yongping" uniqKey="Duan Y" first="Yongping" last="Duan">Yongping Duan</name><name sortKey="Zhang, Shouan" sort="Zhang, Shouan" uniqKey="Zhang S" first="Shouan" last="Zhang">Shouan Zhang</name><name sortKey="Zhou, Lijuan" sort="Zhou, Lijuan" uniqKey="Zhou L" first="Lijuan" last="Zhou">Lijuan Zhou</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/Main/Exploration
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Ou
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|texte= Genetic Diversity of Candidatus Liberibacter asiaticus Based on Two Hypervariable Effector Genes in Thailand
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Pour générer des pages wiki
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